Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905276.1_cds_XP_016455494.1_49422
CDS Infomation

[gene=LOC107779555] [db_xref=GeneID:107779555] [protein=mannan endo-1,4-beta-mannosidase 6-like isoform X4] [protein_id=XP_016455494.1] [location=join(154946..155206,155596..155790,155895..156017,156141..156352,156827..157262)] [gbkey=CDS]
Sequence

ATGGAAGATGGAGAATGGACAATGGTGCAGAAAAGTGGGAACCAATTTGTGGTGAATGGC
CAACCTTTTTATGTGAATGGATTCAATACTTACTGGTTAATGGTGTTTGCTGCTGATCAG
TCCACAAGGGGAAAAGTTACTGAGACGTTTCAGCAGGCGTCTGCTGTCGGTCTATCAGTA
TGCCGGACTTGGGCATTTAATGATGGCCAATGGCGAGCTCTTCAGAAAACTCCTTCTGTT
TATGACGAAGACGTTTTCAAGGCTCTGGATTTTGTGGTGAGTGAAGCCAAGAAATACAAG
ATCAGACTGATACTATCACTAGTCAACAACTGGGAAGCGTATGGCGGAAAATCCCAGTAT
GTAAAATGGGGTAAAGCTGCTGGCCTGAATTTAACTTCTGATGATGATTTCTTTTCTCAT
CCCATACTCAAAAGCTACTACAAGGCTCATGTGAAGGCTGTGCTCAATAGAGTGAATACC
TTTACCAACATAACATACAAAGACGATCCTACTATTTTCGGTTGGGAACTGATGAACGAA
CCACGTTGTGAATCAGATCCTTCTGGGGATAAACTGCAGGCTTGGATAGAAGAAATGGCA
GTTTATGTGAAGAGCATTGATCCGAAGCATTTAGTGGAGATCGGACTCGAAGGTTTCTAT
GGTCTCTCAACTCCTAACCGGGCTCAGGTCAACCCAAATTCCTATGCTCAACAAGTTGGA
ACTGACTTCATTAGAAATCATCAGGTTCTTGGGGTTGATTTCGCTTCAGTTCACATATAT
CCAGACTCTTGGATTTCAAAATCGATTTCTGATGCTCATGTCGAATTCACCAAGTCATGG
ATGCAATCACACATTGATGACGCGGAGAACTATCTCAACATGCCAGTTATATTTGCAGAG
TTTGGTGTTTCCGCGAAAGACCCTGGCTACAATTCGACTTACAGGGATACACTAATCGCT
ACAGTTTACAAAACAATCTTGAATTCGACTAAAAAAGGAGGAGCTGGAGGTGGAAGTCTT
TTGTGGCAAGTATTTCCAGAAGGAACAGATTACATGGATGATGGTTATGCAATAGTACTT
TCAAAGTCACTCTCAACCTCGAACATCGTCTCTCTTCATTCTAAAAAGCTAAATACCTTC
AATTCCTTCTGTTCTTGGAAATGCCACTGGGGTTGCAGAAAGAAACATGTCCTACTAGAC
GACTTCCAATCTCGTGATGAGCTTTAA

Peptide Sequence

PEP ID

XP_016455494.1
PEP Infomation

PREDICTED: mannan endo-1,4-beta-mannosidase 6-like isoform X4 [Nicotiana tabacum]
Sequence

MEDGEWTMVQKSGNQFVVNGQPFYVNGFNTYWLMVFAADQSTRGKVTETFQQASAVGLSV
CRTWAFNDGQWRALQKTPSVYDEDVFKALDFVVSEAKKYKIRLILSLVNNWEAYGGKSQY
VKWGKAAGLNLTSDDDFFSHPILKSYYKAHVKAVLNRVNTFTNITYKDDPTIFGWELMNE
PRCESDPSGDKLQAWIEEMAVYVKSIDPKHLVEIGLEGFYGLSTPNRAQVNPNSYAQQVG
TDFIRNHQVLGVDFASVHIYPDSWISKSISDAHVEFTKSWMQSHIDDAENYLNMPVIFAE
FGVSAKDPGYNSTYRDTLIATVYKTILNSTKKGGAGGGSLLWQVFPEGTDYMDDGYAIVL
SKSLSTSNIVSLHSKKLNTFNSFCSWKCHWGCRKKHVLLDDFQSRDEL

Transcript Sequence

Gene sequence data has not been registered.